You can also find my articles on my Google Scholar profile
Karren Dai Yang, Anastasiya Belyaeva, Saradha Venkatachalapathy, Karthik Damodaran, Abigail Katcoff, Adityanarayanan Radhakrishnan, GV Shivashankar, Caroline Uhler
Published in Nature Communications, 2021
This paper presents an approach to translate between data modalities via a shared latent space
Karren Dai Yang, Karthik Damodaran, Saradha Venkatachalapathy, Ali C Soylemezoglu, GV Shivashankar, Caroline Uhler
Published in PLoS computational biology, 2020
This paper presents an approach to model lineages from images:ImageAEOT.
Saradha Venkatachalapathy, Doorgesh Sharma Jokhun, and G. V. Shivashankar
Published in Molecular Biology of the Cell, 2020
In this study, we map fibroblast cell shapes to their activation level and demontrate a causal relationship between the two.
Damodaran K#, Saradha Venkatachalapathy#, Alisafaei, Radhakrishnan AV, Sharma Jokhun D, Shenoy VB, and Shivashankar GV (#Equal contribution)
Published in Molecular Biology of the Cell , 2018
In this work we show that when given the same compressive force stimulus, cell of different shapes have different transcriptional response
Roy B, Saradha Venkatachalapathy, Ratna P, Wang Y, Jokhun DS, Nagarajan M, and Shivashankar GV
Published in Proceedings of the National Academy of Sciences, 2018
In this paper we describe a novel method of reprogramming fibroblasts to iPSC-like cells.
Belyaeva A,Saradha Venkatachalapathy, Nagarajan M, Shivashankar GV, and Uhler C
Published in Proceedings of the National Academy of Sciences, 2017
This study demonstrates that the inter chromosomal contacts are crucial elements of transcription regulation.
Mitra A, Saradha Venkatachalapathy, Ratna P, Wang Y, Jokhun DS, and Shivashankar GV
Published in Proceedings of the National Academy of Sciences, 2017
In this work we demonstrate cells of different shapes respond differently to inflammatory cues PaperScience Feature
Radhakrishnan AV, Jokhun DS, Saradha Venkatachalapathy, and Shivashankar GV
Published in Biophysical Journal, 2017
This paper explores how the positional dynamics of the nucleus is modulated in cells of different shapes